HW 8 network resilience Help Center

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Warning: The hard deadline has passed. You can attempt it, but you will not get credit for it. You are welcome to try it as a learning exercise.

Question 1

The article 'The Human Disease Network' examines genes tied to diseases. These can be divided into essential genes (without them the organism cannot survive) and non-essential genes (mutations in these genes can still produce viable organisms). What kinds of proteins are non-essential genes more likely to encode?

Question 2

Continuing with the 'The Human Disease Network', answer the following. The high degree of connectivity between different types of cancer in the HDN (human disease network) occurs because

Question 3

Using a NetLogo model of a small social network, examine the size of the giant component under 3 kinds of attack: removing the highest degree nodes, highest betweenness nodes, and highest closeness nodes. In each case, remove 25 nodes. Which approach has the greatest effect on the network connectivity?

Question 4

Read the "Connectivity and Stability" section of Rethinking the financial network (and feel free to read the rest of the paper as well!). Which of the following explains the "robust-yet-fragile" property of connected networks?

Question 5

Skim Stability of Ecological Communities and the Architecture of Mutualistic and Trophic Networks. Mutualistic networks in ecology are ones where the edges represent a mutually beneficial interaction between species, e.g. a flowering plant and its pollinator. In trophic networks, edges represent predator-prey relationships between the species. The observed ecosystems have developed to be resilient to perturbations (e.g. one species declining or going extinct). Which of the following is true?
    
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